Package: LISTO 0.8.1

LISTO: Performing Comprehensive Overlap Assessments

The implementation of a statistical framework for performing overlap assessments on lists comprising sets of strings (such as lists of gene sets) described in Stoica (2023) <https://ora.ox.ac.uk/objects/uuid:b0847284-a02f-47ee-88e3-a3c4e0cdb8b1>. It can assess overlaps of pairs of sets of strings selected either from the same universe or from different universes, and overlaps of triplets of sets of strings selected from the same universe. Designed for single-cell RNA-sequencing data analysis applications, but suitable for other purposes as well.

Authors:Andrei-Florian Stoica [aut, cre]

LISTO_0.8.1.tar.gz
LISTO_0.8.1.zip(r-4.7-any)LISTO_0.8.1.zip(r-4.6-any)LISTO_0.8.1.zip(r-4.5-any)
LISTO_0.8.1.tgz(r-4.6-any)LISTO_0.8.1.tgz(r-4.5-any)
LISTO_0.8.1.tar.gz(r-4.7-any)LISTO_0.8.1.tar.gz(r-4.6-any)
LISTO_0.8.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
LISTO/json (API)

# Install 'LISTO' in R:
install.packages('LISTO', repos = c('https://andrei-stoica26.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/andrei-stoica26/listo/issues

On CRAN:

Conda:

4.95 score 2 stars 2 packages 1 scripts 392 downloads 15 exports 4 dependencies

Last updated from:aad4d6630e. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK285
source / vignettesOK203
linux-releaseOK281
macos-releaseOK200
macos-oldrelOK300
windows-develOK2319
windows-releaseOK2304
windows-oldrelOK1452
wasm-releaseOK170

Exports:buildSeuratMarkerListfactorialPrimePowersmtCorrectDFmtCorrectVprobCounts2MNprobCounts3NpvalCounts2MNpvalCounts3NpvalObjectspvalSets2MNpvalSets2NpvalSets3NrunLISTOvChoosevSum

Dependencies:omnibusprimesRcppstatisfactory