Package: LISTO 0.8.0
LISTO: Performing Comprehensive Overlap Assessments
The implementation of a statistical framework for performing overlap assessments on lists comprising sets of strings (such as lists of gene sets) described in Stoica (2023) <https://ora.ox.ac.uk/objects/uuid:b0847284-a02f-47ee-88e3-a3c4e0cdb8b1>. It can assess overlaps of pairs of sets of strings selected either from the same universe or from different universes, and overlaps of triplets of sets of strings selected from the same universe. Designed for single-cell RNA-sequencing data analysis applications, but suitable for other purposes as well.
Authors:
LISTO_0.8.0.tar.gz
LISTO_0.8.0.zip(r-4.7)LISTO_0.8.0.zip(r-4.6)LISTO_0.8.0.zip(r-4.5)
LISTO_0.8.0.tgz(r-4.6-any)LISTO_0.8.0.tgz(r-4.5-any)
LISTO_0.8.0.tar.gz(r-4.7-any)LISTO_0.8.0.tar.gz(r-4.6-any)
LISTO_0.8.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
LISTO/json (API)
NEWS
| # Install 'LISTO' in R: |
| install.packages('LISTO', repos = c('https://andrei-stoica26.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/andrei-stoica26/listo/issues
Last updated from:84f13282d9. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 326 | ||
| source / vignettes | OK | 268 | ||
| linux-release-x86_64 | OK | 316 | ||
| macos-release-arm64 | OK | 185 | ||
| macos-oldrel-arm64 | OK | 156 | ||
| windows-devel | OK | 1435 | ||
| windows-release | OK | 1370 | ||
| windows-oldrel | OK | 1380 | ||
| wasm-release | OK | 209 |
Exports:buildSeuratMarkerListfactorialPrimePowersmtCorrectDFmtCorrectVprobCounts2MNprobCounts3NpvalCounts2MNpvalCounts3NpvalObjectspvalSets2MNpvalSets2NpvalSets3NrunLISTOvChoosevSum
Dependencies:omnibusprimesRcppstatisfactory
